Dataset
FASTQ reads, StephenLavelle, 07-Sep-2014
2 5 316.1 KB
Project Statistics
| Total reads (all samples) | 6000 (6,000) |
| Read length | 51 |
| Mean % GC content | 51 ± 0 |
Raw Read Statistics
| Sample name | Index | Lane | Read | Number of reads | Percent gc | Read length |
|---|---|---|---|---|---|---|
| QQ1H2O1 | CGATGT | 1 | R1 | 2,000 | 51.0 | 51 |
| QQ1H2O2 | TGACCA | 1 | R1 | 2,000 | 51.0 | 51 |
| QQ1H2O3 | CAGATC | 1 | R1 | 2,000 | 51.0 | 51 |
FastQC Summary
Please note: failed QC checks don't always indicate a problem with the data ! Please read the FastQC documentation.
FastQC version: 0.11.4
| Sample | Basic Statistics | Per base sequence quality | Per sequence quality scores | Per base sequence content | Per sequence GC content | Per base N content | Sequence Length Distribution | Sequence Duplication Levels | Overrepresented sequences | Adapter Content | Kmer Content |
|---|
Datafile Information
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Dataset Metadata
| Nucleotide Sequencing Project Raw Reads | |
|---|---|
| Terminator chemistry | TruSeq LT |
| Associated FastQC reports | FastQC reports for Project StephenLavelle, 07-Sep-2014 |
| Flowcell ID | C9246ACXX |
| ingestor_useragent | illumina_uploader.py/1.22.0 (https://github.com/pansapiens/mytardis_ngs_ingestor) |
| Instrument ID | DMO177 |
| Instrument model | HiSeq1500 |
| Instrument operator | |
| Number of cycles in each read [index reads in (brackets)] | 51, (7) |
| Illumina RTA version | RTA 2.7.3 |
| Run Experiment link | Example: HiSeq1500 run 140907_DMO177_0002_AC9246ACXX |
| Run Unique ID | 140907_DMO177_0002_AC9246ACXX |
| Run number | 2.0 |
Other Experiments
This dataset also appears in these experiments.